INESC TEC
INESC TEC
INESC TEC
Resultados da pesquisa para:
Filtrar os seus resultados

0 Resultados

Pedro Gabriel Ferreira

Pedro Gabriel Ferreira

Pedro G. Ferreira graduated in Systems and Informatics Engineering (2002) and completed a PhD in Artificial Intelligence from University of Minho (2007). He was a Postdoctoral Fellow at Center for Genomic Regulation, Barcelona (2008-2012) and at University of Geneva (2012-2014). He participated in several major international consortia including ICGC-CLL, ENCODE, GEUVADIS and GTEx. Currently, he is an Assistant Professor at the Department of Computer Science, Faculty of Sciences of University of Porto and a researcher at INESCTEC-LIADD and i3s/Ipatimup. His main research focus is in genomic data science. In particular, he is interested in unraveling the role of genomics on the human health and disease. He has been involved in several bioinformatics start-ups.

Projetos

Publicações

The landscape of expression and alternative splicing variation across human traits

García Pérez, R;Ramirez, JM;Ripoll Cladellas, A;Chazarra Gil, R;Oliveros, W;Soldatkina, O;Bosio, M;Rognon, PJ;Capella Gutierrez, S;Calvo, M;Reverter, F;Guigó, R;Aguet, F;Ferreira, PG;Ardlie, KG;Melé, M;

2023

Cell Genomics

An integrated encyclopedia of DNA elements in the human genome

Dunham, I;Kundaje, A;Aldred, SF;Collins, PJ;Davis, C;Doyle, F;Epstein, CB;Frietze, S;Harrow, J;Kaul, R;Khatun, J;Lajoie, BR;Landt, SG;Lee, BK;Pauli, F;Rosenbloom, KR;Sabo, P;Safi, A;Sanyal, A;Shoresh, N;Simon, JM;Song, L;Trinklein, ND;Altshuler, RC;Birney, E;Brown, JB;Cheng, C;Djebali, S;Dong, XJ;Dunham, I;Ernst, J;Furey, TS;Gerstein, M;Giardine, B;Greven, M;Hardison, RC;Harris, RS;Herrero, J;Hoffman, MM;Iyer, S;Kellis, M;Khatun, J;Kheradpour, P;Kundaje, A;Lassmann, T;Li, QH;Lin, X;Marinov, GK;Merkel, A;Mortazavi, A;Parker, SCJ;Reddy, TE;Rozowsky, J;Schlesinger, F;Thurman, RE;Wang, J;Ward, LD;Whitfield, TW;Wilder, SP;Wu, W;Xi, HLS;Yip, KY;Zhuang, JL;Bernstein, BE;Birney, E;Dunham, I;Green, ED;Gunter, C;Snyder, M;Pazin, MJ;Lowdon, RF;Dillon, LAL;Adams, LB;Kelly, CJ;Zhang, J;Wexler, JR;Green, ED;Good, PJ;Feingold, EA;Bernstein, BE;Birney, E;Crawford, GE;Dekker, J;Elnitski, L;Farnham, PJ;Gerstein, M;Giddings, MC;Gingeras, TR;Green, ED;Guigo, R;Hardison, RC;Hubbard, TJ;Kellis, M;Kent, WJ;Lieb, JD;Margulies, EH;Myers, RM;Snyder, M;Stamatoyannopoulos, JA;Tenenbaum, SA;Weng, ZP;White, KP;Wold, B;Khatun, J;Yu, Y;Wrobel, J;Risk, BA;Gunawardena, HP;Kuiper, HC;Maier, CW;Xie, L;Chen, X;Giddings, MC;Bernstein, BE;Epstein, CB;Shoresh, N;Ernst, J;Kheradpour, P;Mikkelsen, TS;Gillespie, S;Goren, A;Ram, O;Zhang, XL;Wang, L;Issner, R;Coyne, MJ;Durham, T;Ku, M;Truong, T;Ward, LD;Altshuler, RC;Eaton, ML;Kellis, M;Djebali, S;Davis, CA;Merkel, A;Dobin, A;Lassmann, T;Mortazavi, A;Tanzer, A;Lagarde, J;Lin, W;Schlesinger, F;Xue, CH;Marinov, GK;Khatun, J;Williams, BA;Zaleski, C;Rozowsky, J;Roeder, M;Kokocinski, F;Abdelhamid, RF;Alioto, T;Antoshechkin, I;Baer, MT;Batut, P;Bell, I;Bell, K;Chakrabortty, S;Chen, X;Chrast, J;Curado, J;Derrien, T;Drenkow, J;Dumais, E;Dumais, J;Duttagupta, R;Fastuca, M;Fejes Toth, K;Ferreira, P;Foissac, S;Fullwood, MJ;Gao, H;Gonzalez, D;Gordon, A;Gunawardena, HP;Howald, C;Jha, S;Johnson, R;Kapranov, P;King, B;Kingswood, C;Li, GL;Luo, OJ;Park, E;Preall, JB;Presaud, K;Ribeca, P;Risk, BA;Robyr, D;Ruan, XA;Sammeth, M;Sandhu, KS;Schaeffer, L;See, LH;Shahab, A;Skancke, J;Suzuki, AM;Takahashi, H;Tilgner, H;Trout, D;Walters, N;Wang, HE;Wrobel, J;Yu, YB;Hayashizaki, Y;Harrow, J;Gerstein, M;Hubbard, TJ;Reymond, A;Antonarakis, SE;Hannon, GJ;Giddings, MC;Ruan, YJ;Wold, B;Carninci, P;Guigo, R;Gingeras, TR;Rosenbloom, KR;Sloan, CA;Learned, K;Malladi, VS;Wong, MC;Barber, G;Cline, MS;Dreszer, TR;Heitner, SG;Karolchik, D;Kent, WJ;Kirkup, VM;Meyer, LR;Long, JC;Maddren, M;Raney, BJ;Furey, TS;Song, LY;Grasfeder, LL;Giresi, PG;Lee, BK;Battenhouse, A;Sheffield, NC;Simon, JM;Showers, KA;Safi, A;London, D;Bhinge, AA;Shestak, C;Schaner, MR;Kim, SK;Zhang, ZZZ;Mieczkowski, PA;Mieczkowska, JO;Liu, Z;McDaniell, RM;Ni, YY;Rashid, NU;Kim, MJ;Adar, S;Zhang, ZC;Wang, TY;Winter, D;Keefe, D;Birney, E;Iyer, VR;Lieb, JD;Crawford, GE;Li, GL;Sandhu, KS;Zheng, MZ;Wang, P;Luo, OJ;Shahab, A;Fullwood, MJ;Ruan, XA;Ruan, YJ;Myers, RM;Pauli, F;Williams, BA;Gertz, J;Marinov, GK;Reddy, TE;Vielmetter, J;Partridge, EC;Trout, D;Varley, KE;Gasper, C;Bansal, A;Pepke, S;Jain, P;Amrhein, H;Bowling, KM;Anaya, M;Cross, MK;King, B;Muratet, MA;Antoshechkin, I;Newberry, KM;Mccue, K;Nesmith, AS;Fisher Aylor, KI;Pusey, B;DeSalvo, G;Parker, SL;Balasubramanian, S;Davis, NS;Meadows, SK;Eggleston, T;Gunter, C;Newberry, JS;Levy, SE;Absher, DM;Mortazavi, A;Wong, WH;Wold, B;Blow, MJ;Visel, A;Pennachio, LA;Elnitski, L;Margulies, EH;Parker, SCJ;Petrykowska, HM;Abyzov, A;Aken, B;Barrell, D;Barson, G;Berry, A;Bignell, A;Boychenko, V;Bussotti, G;Chrast, J;Davidson, C;Derrien, T;Despacio Reyes, G;Diekhans, M;Ezkurdia, I;Frankish, A;Gilbert, J;Gonzalez, JM;Griffiths, E;Harte, R;Hendrix, DA;Howald, C;Hunt, T;Jungreis, I;Kay, M;Khurana, E;Kokocinski, F;Leng, J;Lin, MF;Loveland, J;Lu, Z;Manthravadi, D;Mariotti, M;Mudge, J;Mukherjee, G;Notredame, C;Pei, BK;Rodriguez, JM;Saunders, G;Sboner, A;Searle, S;Sisu, C;Snow, C;Steward, C;Tanzer, A;Tapanari, E;Tress, ML;van Baren, MJ;Walters, N;Washietl, S;Wilming, L;Zadissa, A;Zhang, ZD;Brent, M;Haussler, D;Kellis, M;Valencia, A;Gerstein, M;Reymond, A;Guigo, R;Harrow, J;Hubbard, TJ;Landt, SG;Frietze, S;Abyzov, A;Addleman, N;Alexander, RP;Auerbach, RK;Balasubramanian, S;Bettinger, K;Bhardwaj, N;Boyle, AP;Cao, AR;Cayting, P;Charos, A;Cheng, Y;Cheng, C;Eastman, C;Euskirchen, G;Fleming, JD;Grubert, F;Habegger, L;Hariharan, M;Harmanci, A;Iyengar, S;Jin, VX;Karczewski, KJ;Kasowski, M;Lacroute, P;Lam, H;Lamarre Vincent, N;Leng, J;Lian, J;Lindahl Allen, M;Min, RQ;Miotto, B;Monahan, H;Moqtaderi, Z;Mu, XMJ;O'Geen, H;Ouyang, ZQ;Patacsil, D;Pei, BK;Raha, D;Ramirez, L;Reed, B;Rozowsky, J;Sboner, A;Shi, MY;Sisu, C;Slifer, T;Witt, H;Wu, LF;Xu, XQ;Yan, KK;Yang, XQ;Yip, KY;Zhang, ZD;Struhl, K;Weissman, SM;Gerstein, M;Farnham, PJ;Snyder, M;Tenenbaum, SA;Penalva, LO;Doyle, F;Karmakar, S;Landt, SG;Bhanvadia, RR;Choudhury, A;Domanus, M;Ma, LJ;Moran, J;Patacsil, D;Slifer, T;Victorsen, A;Yang, XQ;Snyder, M;White, KP;Auer, T;Centanin, L;Eichenlaub, M;Gruhl, F;Heermann, S;Hoeckendorf, B;Inoue, D;Kellner, T;Kirchmaier, S;Mueller, C;Reinhardt, R;Schertel, L;Schneider, S;Sinn, R;Wittbrodt, B;Wittbrodt, J;Weng, ZP;Whitfield, TW;Wang, J;Collins, PJ;Aldred, SF;Trinklein, ND;Partridge, EC;Myers, RM;Dekker, J;Jain, G;Lajoie, BR;Sanyal, A;Balasundaram, G;Bates, DL;Byron, R;Canfield, TK;Diegel, MJ;Dunn, D;Ebersol, AK;Frum, T;Garg, K;Gist, E;Hansen, RS;Boatman, L;Haugen, E;Humbert, R;Jain, G;Johnson, AK;Johnson, EM;Kutyavin, TV;Lajoie, BR;Lee, K;Lotakis, D;Maurano, MT;Neph, SJ;Neri, FV;Nguyen, ED;Qu, HZ;Reynolds, AP;Roach, V;Rynes, E;Sabo, P;Sanchez, ME;Sandstrom, RS;Sanyal, A;Shafer, AO;Stergachis, AB;Thomas, S;Thurman, RE;Vernot, B;Vierstra, J;Vong, S;Wang, H;Weaver, MA;Yan, YQ;Zhang, MH;Akey, JM;Bender, M;Dorschner, MO;Groudine, M;MacCoss, MJ;Navas, P;Stamatoyannopoulos, G;Kaul, R;Dekker, J;Stamatoyannopoulos, JA;Dunham, I;Beal, K;Brazma, A;Flicek, P;Herrero, J;Johnson, N;Keefe, D;Lukk, M;Luscombe, NM;Sobral, D;Vaquerizas, JM;Wilder, SP;Batzoglou, S;Sidow, A;Hussami, N;Kyriazopoulou Panagiotopoulou, S;Libbrecht, MW;Schaub, MA;Kundaje, A;Hardison, RC;Miller, W;Giardine, B;Harris, RS;Wu, W;Bickel, PJ;Banfai, B;Boley, NP;Brown, JB;Huang, HY;Li, QH;Li, JJ;Noble, WS;Bilmes, JA;Buske, OJ;Hoffman, MM;Sahu, AD;Kharchenko, PV;Park, PJ;Baker, D;Taylor, J;Weng, ZP;Iyer, S;Dong, XJ;Greven, M;Lin, XY;Wang, J;Xi, HLS;Zhuang, JL;Gerstein, M;Alexander, RP;Balasubramanian, S;Cheng, C;Harmanci, A;Lochovsky, L;Min, R;Mu, XMJ;Rozowsky, J;Yan, KK;Yip, KY;Birney, E;

2012

NATURE

Mitotic cell-cycle progression is regulated by CPEB1 and CPEB4-dependent translational control

Novoa, I;Gallego, J;Ferreira, PG;Mendez, R;

2010

NATURE CELL BIOLOGY

Landscape of transcription in human cells

Djebali, S;Davis, CA;Merkel, A;Dobin, A;Lassmann, T;Mortazavi, A;Tanzer, A;Lagarde, J;Lin, W;Schlesinger, F;Xue, CH;Marinov, GK;Khatun, J;Williams, BA;Zaleski, C;Rozowsky, J;Roeder, M;Kokocinski, F;Abdelhamid, RF;Alioto, T;Antoshechkin, I;Baer, MT;Bar, NS;Batut, P;Bell, K;Bell, I;Chakrabortty, S;Chen, X;Chrast, J;Curado, J;Derrien, T;Drenkow, J;Dumais, E;Dumais, J;Duttagupta, R;Falconnet, E;Fastuca, M;Fejes Toth, K;Ferreira, P;Foissac, S;Fullwood, MJ;Gao, H;Gonzalez, D;Gordon, A;Gunawardena, H;Howald, C;Jha, S;Johnson, R;Kapranov, P;King, B;Kingswood, C;Luo, OJ;Park, E;Persaud, K;Preall, JB;Ribeca, P;Risk, B;Robyr, D;Sammeth, M;Schaffer, L;See, LH;Shahab, A;Skancke, J;Suzuki, AM;Takahashi, H;Tilgner, H;Trout, D;Walters, N;Wang, H;Wrobel, J;Yu, YB;Ruan, XA;Hayashizaki, Y;Harrow, J;Gerstein, M;Hubbard, T;Reymond, A;Antonarakis, SE;Hannon, G;Giddings, MC;Ruan, YJ;Wold, B;Carninci, P;Guigo, R;Gingeras, TR;

2012

NATURE

Ver todas as publicações

Teses Orientadas

Transcriptomics-based prediction of human phenotypes using scalable and secure machine learning approaches

Marta Carolina Cabral Moreno

D - 2019

UP-FCUP

Transcriptomics-based prediction of human phenotypes using scalable and secure machine learning approaches

Marta Carolina Cabral Moreno

D - 2020

UP-FCUP

HSA/CD24: a cardiomyocyte precursor biomarker and/or a gateway to cardiomyogenesis

Catarina Lopes Alves

M - 2020

UP-FCUP

Information and Contacts